TABLE 2.
Library | Total no. of clones | No. of groups | % Coverageb | Chao I |
---|---|---|---|---|
December 2001 river | 76 | 33 | 57 | 65 (43, 129) |
August 2002 river | 95 | 23 | 76 | 37 (26, 79) |
August 2002 river RNA | 96 | 21 | 79 | 31 (22, 74) |
August 2002 bay | 107 | 26 | 76 | 61 (36, 152) |
Groups were defined at 3% amino acid sequence divergence. The Chao I index was calculated using the DOTUR software program. Numbers in parentheses are 95% confidence limits.
Percent coverage was calculated with the formula [1 − (n/N)] × 100, where n is the number of singleton clones and N is the total number of sequences.