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. 2008 May 9;74(13):4012–4021. doi: 10.1128/AEM.02324-07

TABLE 2.

Composition and diversity of pufM PCR and RT-PCR libraries from the Delaware estuary in December 2001 and August 2002a

Library Total no. of clones No. of groups % Coverageb Chao I
December 2001 river 76 33 57 65 (43, 129)
August 2002 river 95 23 76 37 (26, 79)
August 2002 river RNA 96 21 79 31 (22, 74)
August 2002 bay 107 26 76 61 (36, 152)
a

Groups were defined at 3% amino acid sequence divergence. The Chao I index was calculated using the DOTUR software program. Numbers in parentheses are 95% confidence limits.

b

Percent coverage was calculated with the formula [1 − (n/N)] × 100, where n is the number of singleton clones and N is the total number of sequences.