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. 2008 Apr 25;74(13):4226–4230. doi: 10.1128/AEM.00013-08

TABLE 1.

Primers used to generate constructs for NoV capsid expression system and real-time PCR standard curve plasmids in this study

Group and genotype Primer Sequence (5′ to 3′) Polaritya Restriction enzyme site Locationd
NoV capsid expression vectors
    GI-1 GIF GAA TTC ATG ATG ATG GCG TCT AAG G + EcoRI 5358-5376
GIR GCG GCC GCC AGT GTG ATG GAT A NotI TOPO vectore
    GII-4 GIIF CAT ATG AAG ATG GCG TCG AGT G + NdeI 5058-5103
GIIR TAA ACT GGA AGG AAG CTT GAT G HindIII 6827-6842
Real-time PCR standard curve plasmids
    GI-1 GI SCCF TGG ARA TGT ATG TCC CAG G + 5256-5274
GI SCCR CCA ACC CAR CCA TTR TAC Ab 5653-5671
    GII-4 GII SCCF RGC TNT NGA AAT NAT GGTc + 4338-4355
GII SCCR CCR CCN GCA TRH CCR TTR TAC ATb 5367-5389
a

+, sense primer; −, antisense primer.

b

See reference 17.

c

Modified nucleotides from reference 18.

d

Nucleotide positions based on the Norwalk virus (GI, accession no. M87661) and Lordsdale virus (GII, accession no. X86557).

e

pCR2.1-TOPO vector (Invitrogen).