TABLE 2.
Isolate or parameter | Bacterial phyluma | Sampleb from 35-55 cm on day:
|
Sampleb from 80-100 cm on day:
|
||||||
---|---|---|---|---|---|---|---|---|---|
7 | 14 | 21 | 28 | 7 | 14 | 21 | 28 | ||
SEQ 1 | CFB | + | + | + | |||||
SEQ 2 | CFB | + | + | ||||||
SEQ 3 | CFB | − | |||||||
SEQ 4 | Betaproteobacteria | + | + | + | + | + | |||
SEQ 5 | Betaproteobacteria | + | + | + | + | + | + | + | |
SEQ 6 | Betaproteobacteria | + | + | ||||||
SEQ 7 | Betaproteobacteria | − | |||||||
SEQ 8 | Betaproteobacteria | − | |||||||
SEQ 9 | Betaproteobacteria | + | + | ||||||
SEQ 10 | Betaproteobacteria | − | |||||||
SEQ 11 | Betaproteobacteria | − | |||||||
SEQ 12 | Betaproteobacteria | + | + | + | |||||
SEQ 13 | Betaproteobacteria | + | + | + | |||||
SEQ 14 | Betaproteobacteria | + | + | + | + | + | + | ||
SEQ 15 | Betaproteobacteria | − | |||||||
SEQ 16 | Betaproteobacteria | − | |||||||
SEQ 17 | Betaproteobacteria | + | + | + | + | ||||
SEQ 18 | Gammaproteobacteria | − | |||||||
SEQ 19 | Gammaproteobacteria | + | + | ||||||
SEQ 20 | Gammaproteobacteria | − | |||||||
SEQ 21 | Alphaproteobacteria | − | |||||||
SEQ 22 | Firmicutes | − | |||||||
SEQ 23 | Actinobacteria | + | + | + | + | + | |||
SEQ 24 | Actinobacteria | + | + | ||||||
SEQ 25 | Actinobacteria | + | + | ||||||
No. of sequences | 8 | 3 | 8 | 12 | 3 | 7 | 11 | 7 | |
No. of 1st appearances | 8 | 2 | 2 | 5 | 3 | 6 | 6 | 1 |
CFB, Cytophaga-Flavobacterium-Bacteroidetes. Alphaproteobacteria, Betaproteobacteria, and Gammaproteobacteria are subphyla of Proteobacteria.
+, presence of a specific sequence; −, unique sequence not seen at another sampling time.