TABLE 6.
Genes downregulated by the G648D mutation in Upc2p
CandidaDB namea | Common nameb | orf19 no.c | GO annotation (molecular function)d | Fold decrease in expression
|
|||||
---|---|---|---|---|---|---|---|---|---|
S2 vs S1
|
UPC2S2-1 vs UPC2S1-1
|
||||||||
Strain A
|
Strain B
|
||||||||
Expt 1 | Expt 2 | Expt 1 | Expt 2 | Expt 1 | Expt 2 | ||||
COQ1 | orf19.7478 | trans-Hexaprenyltranstransferase activity | −2.8 | −2.9 | −1.5 | −2.5 | −2.4 | −3.8 | |
MAS2 | orf19.6295 | Mitochondrial processing peptidase activity | −1.6 | −1.7 | −1.6 | −2.3 | −2.7 | −2.9 | |
MET14 | MET14 | orf19.946 | Adenylylsulfate kinase activity | −5.6 | −6.9 | −2.3 | −2.9 | −3.5 | −3.7 |
MET3 | MET3 | orf19.5025 | Sulfate adenylyltransferase (ATP) activity | −4.2 | −3.8 | −3.3 | −4.0 | −3.5 | −5.9 |
PET127 | orf19.2309 | RNA binding | −1.7 | −1.8 | −2.0 | −4.4 | −7.7 | −5.9 | |
IPF11801 | orf19.2798 | Helicase activity | −1.6 | −1.7 | −2.3 | −2.2 | −2.0 | −1.8 | |
IPF14872 | orf19.4133 | −2.0 | −1.8 | −1.8 | −3.5 | −2.3 | −4.0 | ||
IPF20118 | orf19.3846 | −3.8 | −4.4 | −3.6 | −3.1 | −1.7 | −1.6 | ||
IPF525 | orf19.7085 | −2.4 | −2.2 | −1.7 | −3.1 | −1.7 | −1.7 | ||
IPF6504 | orf19.1544 | −2.1 | −2.0 | −1.8 | −1.5 | −1.7 | −1.6 | ||
IPF7334 | orf19.3724 | −2.3 | −2.2 | −1.6 | −3.1 | −1.8 | −3.4 |
Gene name from CandidaDB (http://genolist.pasteur.fr/CandidaDB/).
Gene name from CGD (http://www.candidagenome.org/).
orf19 nomenclature according to assembly 19.
Gene Ontology (GO) (4) annotation found at CGD (http://www.candidagenome.org/).