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. 2008 Apr 9;46(6):2070–2073. doi: 10.1128/JCM.00203-08

TABLE 1.

Four genes with SNPs

Gene (ORF) SNP target Strain Sakai nucleotide Amino acid position Codon polymorphisma Nonsynonymous or synonymousb Function
ECs2357 539 C 180 T c/a C NON Hypothetical protein
ECs2521 1060 T 354 g/t CC NON p-Aminobenzoate synthetase component I
ECs3881 438 T 146 A C t/c SYN Hydrogenase-2 small subunit
ECs4130 630 T 210 G C t/c SYN Sodium/pantothenate symporter
a

Lowercase letters indicate positions of reference versus diagnostic amino acids in the SNP codon.

b

NON, nonsynonymous; SYN, synonymous.