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. 2008 May 16;190(14):4903–4911. doi: 10.1128/JB.00447-08

TABLE 2.

Lack of specific regulation of genes implicated in respiration chain activitya

Function and geneb ORF descriptionc Ratio
Aero/Stat Resp/Stat
Heme synthesis or utilization
    fhuB Ferrichrome ABC transporter permease protein 1 2
    fhuD Ferrichrome ABC transporter substrate-binding protein 1 2
    fhuG Ferrichrome ABC transporter permease protein 1 2
    fhuR fhu operon transcriptional regulator 1 1
    hemH Ferrochelatase 1 1
    hemK Protoporphyrinogen oxidase 2 1
    hemN O2-independent coproporphyrogen III oxidase 2 2
Electron donor
    noxB Putative membrane NADH dehydrogenase 1 1
Electron transfer
    menB Naphthoate synthase 3 2
    menD 2-Oxoglutarate decarboxylase/2-succinyl-6- hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 2 2
    menE O-Succinylbenzoic acid-CoA ligase 2 2
    menF Menaquinone-specific isochorismate synthase 2 2
    menX Protein in menaquinone biosynthesis pathway 2 2
    yhdB O-Succinylbenzoate-CoA synthase (menC) 2 2
    ybiG Probable 1,4-dihydroxy-2-naphthoate octaprenyltransferase (menH) 3 3
    yljG Probable SAM-dependent methyltransferase (menA) 1 1
    ispA Geranyltranstransferase: MK tail addition 1 1
    ispB Heptaprenyl diphosphate synthase component II: MK tail addition 1 1
Electron acceptor
    cydA Cytochrome bd-I oxidase subunit I 1 1
    cydB Cytochrome d ubiquinol oxidase subunit II 1 1
    cydC Cytochrome d ABC transporter ATP-binding and permease protein 1 1
    cydD Cytochrome d ABC transporter ATP-binding and permease protein 1 1
a

See Table 1 legend.

b

†, Genes whose implication in respiration was tested experimentally (noxB and cydC) (14, 21; P. Gaudu, L. Rezaïki, and L. Hebert, unpublished data).

c

ORF, open reading frame.