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. 2008 May 21;36(Web Server issue):W119–W127. doi: 10.1093/nar/gkn304

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© 2008 The Author(s)

This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.0/uk/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.

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Figure 3. — Example of matrix-scan result obtained by scanning yeast upstream sequences with matrices representing binding motifs for the transcription factors Met4p and Met31p. (A) Sequence logos representing binding motifs of the Met4p and Met31p transcription factors. (B) Feature map of the predicted sites and CRERs in upstream sequences of 26 yeast genes involved in methionine metabolism. (C) Random control: feature map of the predicted sites and CRERs detected in upstream sequences of 26 yeast genes selected at random. (D) Fragment of a matrix-scan result table reporting putative sites.