Table 2.
Product name | Honey bee ID | Forward primer sequences | Reverse primer sequence | Amplicon size (bp) | Amplification efficiencya(Rb) |
Krh1 | GB14867 | ACTCATCAGTTGTTGGTTCTCCTC | TCGTTTGGCTCTTCAGTCTTGTG | 118 | 2.11 (0.99) |
non determined | GB18554 | TCACACCGATATTCTCATCAAAGG | CTTGTCATTCTTGTTCTCCGATTG | 112 | 1.94 (0.98) |
Hr78 | GB18358 | TGACGAAGTTTAGTTGCTGCTATG | TGTTGTTCCCTATGATCTCTGTCC | 107 | 1.98 (0.99) |
Alh | GB17400 | ACTTGTGGTAATGCTGGCTGAC | AACGAACGAAGGAAAGGAATAACG | 129 | 2.08 (0.96) |
baz | GB10346 | ACCAGGAACAAGCGAGTCAGAAG | ACCAGGAACAAGCGAGTCAGAAG | 112 | 2.02 (0.99) |
Honey bee IDs refer to the cDNAs selected from the EST microarray experiment (see text).
Krh1 is the housekeeping gene. Forward and reverse primer sequences and the PCR product length are indicated.
aAmplification efficiencies were calculated from the slope of standard curves as E = 10 [-1/slope] – 1.100% efficiency corresponds to an amplification efficiency of 1; bRegression coefficient of linear standard curve.