Table 4.
Cell cycle genes in the MT1-MMP data.
| σμ [7] | σwtrep | |||||
| Gene Symbol | RefSeq ID | log2 FC | p value | log2 FC | p value | Gene Description |
| CCNA1 | NM_003914 | - | ≥ 0.05 | 1.12 | 0.00 | Cyclin A1 |
| CDC45L | NM_003504 | - | ≥ 0.05 | 1.05 | 0.00 | CDC45 cell division cycle 45-like |
| CCNB1 | NM_031966 | 1.30 | < 0.05 | 1.44 | 0.00 | Cyclin B1 |
| CCNB2 | NM_004701 | 1.27 | < 0.05 | 1.39 | 0.00 | Cyclin B2 |
| CDC2 | NM_033379 | 1.10 | < 0.05 | 1.20 | 0.00 | cell division cycle 2, G1 to S and G2 to M |
| CDC20 | NM_001255 | 2.02 | < 0.05 | 2.01 | 0.00 | Cell division cycle 20 homolog |
The first, second and last column indicate the gene symbol, the RefSeq ID and the description of each cell cycle gene respectively. The third and fourth columns indicate the logarithm fold change and the P-value of each gene found by Golubkov V.S. et. al. [7], which is analogous to using σμ as the summary statistic. The fifth and sixth columns indicate the logarithm fold change and the P-value of each gene found by using σwtrep as the summary statistic. Cutoff criteria of p ≤ 0.05 and |FC| ≥ 2 were applied. The genes in the upper section were found only by the σwtrep statistic, whereas the genes in the lower section were detected with significance by both statistics.