Table 4.
Genes dispensable in M. pulmonis but essential in B. subtilis a
Gene | Product | Gene symbol | Gene length (bp) | Mg ortholog | Essential in Mg, Bs | Mp paralog |
---|---|---|---|---|---|---|
MYPU_1630 | Ribonuclease III (RNase III) | rnc | 726 | MG367 | no, yes | no |
MYPU_1720 | Cysteine desulferase | csd | 1182 | MG336 | yes, yes | MYPU_1730 |
MYPU_3600 | Fructose-biphosphate aldolase | fba | 843 | MG023 | yes, yes | MYPU_1100 |
MYPU_3900 | Lysyl-tRNA synthetase | lysS | 1533 | MG136 | yes, yes | MYPU_4020 |
MYPU_4020 | Lysyl-tRNA synthetase | lysS | 1476 | MG136 | yes, yes | MYPU_3900 |
MYPU_4890 | Ribosomal protein L33 | rpmG | 153 | MG325 | yes, yes | MYPU_1800 |
MYPU_5390 | Ribonucleotide-diphosphate reductase beta subunit | nrdF | 1026 | MG229 | yes, yes | no |
MYPU_5410 | Ribonucleotide-diphosphate reductase alpha subunit | nrdE | 2136 | MG231 | yes, yes | no |
MYPU_6090 | Ribosomal protein S18 | rpsR | 318 | MG092 | yes, yes | no |
MYPU_6840 | GTPase | 819 | MG110 | no, yes | no | |
MYPU_6960 | Ribosomal protein L28 | rpmB | 192 | MG426 | yes, yes | no |
MYPU_6980 | ATP-dependent helicase PcrA | pcrA, uvrD | 2205 | MG244 | no, yes | MYPU_7680 |
MYPU_7210 | Dephospho-coenzyme A kinase | coaE | 519 | MG264 | no, yes | no |
Essential genes in M. genitalium (Mg) and B. subtilis (Bs) are as reported by Glass et al. and Kobayashi et al. (Glass et al., 2006; Kobayashi et al., 2003). M. pulmonis, Mp.