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. Author manuscript; available in PMC: 2009 Jun 20.
Published in final edited form as: Virology. 2008 Apr 18;376(1):42–52. doi: 10.1016/j.virol.2008.03.007

Table 1.

Primers used for mutagenesis. Mutated sequences are underlined. For primers used in PCR mutagenesis procedures, only the forward primer sequence is shown.

Primer Name Primer Sequence Purpose
HA-1 5’-CCGCCTTCGCAATGTACCCATACGATGTTCCAGATTACGCTTCTCAGGCATCGTCC Introduce HA-Tag sequence
71X-1 5’-TTGCCGGAACCCTTCTAGACCTCCCACGAAGAC Introduce Xba I site 5’ of pp71 ORF
MRS 5’-GCAGATCTTTGTCAGCCAGT Amplify MR for random mutagenesis
MRAS 5’-TGACTCGGGATGTATGCGC Amplify MR for random mutagenesis
pp7162MR-For 5’-CTCGAGTCTCTGCTGTTTTC Introduce Xho I site for eGFP-62MR cloning
pp7162MR-N 5’-CTCGAGGAACTTCGTGCCACCATGGAGGTG N-terminal primer for 62MR-eGFP cloning
pp7194MR-N 5′-CTAAACATCAAGGAGCTCACCATGGTGGGCG N-terminal primer for 94MR-eGFP cloning
pp71188MR-N 5′-GCAGAACCGAGCTCACCATGGAGG N-terminal primer for 188MR-eGFP cloning
pp71MR-Rev 5’-GTACCCGGGATGTATGCG Introduce Xma I site for MR-eGFP cloning
S-tag1 5′-CGCCTTCGCAATGAAAGAAACCGCTGCTGCGAAATTTTCTCAGGCATCGTCC Introduce 8 aa of the S-tag sequence
S-tag2 5′-GCTGCTAAATTTGAACGCCAGCACATGGACTCGTCTCAGGCATCGTCC Introduce 7 aa of the S-tag sequence
SV40 5′-GATGTTCCAGATTACGCTCCAAAGAAGAAGAGAAAGGTGTCTCAGGCATCGTCCTCG Introduce the SV40 NLS