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. 2008 Jun 25;3:25. doi: 10.1186/1745-6150-3-25

Table 1.

Details regarding the samples include bird identification and species, isolate of P. relictum and island of origin of isolate; details regarding the methods include enzyme/buffer system and number of cycles for amplification, and method of amplification and cloning*

Bird (DNA log) Species Isolate Tissue Collection Date Island Enzyme Number of cycles Method Total clones Confirmed RFLP variants Confirmed RFLP clones Number of sequences
1 (764) Hemignathus virens K1 Survivor Day 89 PI Kauai Promega 80 PCR+1 20 4 16 0
2 (1145) Hemignathus virens K1 Survivor Day 81 PI Kauai Promega 80 PCR+1 20 6 16 1
3 (1187) Hemignathus virens K1 Survivor Day 69 PI Kauai Promega 80 PCR+1 20 5 17 0
4 (584) Hemignathus virens K1 Fatality Day 16 PI Kauai Promega 80 standard 17 4 15 1
Promega 80 PCR+1 20 5 18 1
5 (591) Hemignathus virens K1 Fatality Day 19 PI Kauai Promega 80 standard 9 4 9 0
Promega 80 PCR+1 20 5 17 1
6 (593) Hemignathus virens K1 Fatality Day 19 PI Kauai Promega 80 standard 10 2 5 0
Promega 80 PCR+1 20 5 16 0
Promega 35 PCR+1 19 3 15 0
Roche 35 PCR+1 20 2 20 10
7 (601) Hemignathus virens KV115 Fatality Day 16 PI Hawaii Promega 80 PCR+1 20 5 16 1
8 (613) Hemignathus virens KV115 Fatality Day 23 PI Hawaii Promega 80 standard 9 5 8 0
9 (736) Hemignathus virens KV115 Survivor Day 81 PI Hawaii Promega 80 PCR+1 20 8 17 4
10 (620) Hemignathus virens KV115 Fatality Day 24 PI Hawaii Promega 80 standard 17 7 17 0
Promega 80 PCR+1 20 5 17 1
11 (623) Hemignathus virens KV115 Fatality Day 26 PI Hawaii Promega 80 standard 9 2 6 0
Promega 80 PCR+1 20 4 13 0
Promega 35 PCR+1 20 4 18 0
Roche 35 PCR+1 20 2 18 10
12 (1757) Hemignathus virens wild Blood 4/20/96 Kauai Promega 80 standard 8 3 6 1
13 (1765) Vesteria coccinea wild Blood 4/5/95 Hawaii Promega 80 standard 9 5 9 1
14 (1818) Himatione sanguinea wild Blood 3/28/95 Hawaii Promega 80 standard 10 5 9 0
15 (1928) Hemignathus virens wild Blood 11/16/93 Maui Promega 80 standard 3 1 2 0
16 (2881) Chasiempis sandwichensis wild Blood 2/3/95 Kauai Promega 80 standard 9 4 8 1
17 (3186) Chasiempis sandwichensis wild Blood 3/13/96 Kauai Promega 80 standard 7 6 6 1
18 (6775) Hemignathus virens wild Blood 4/24/01 Hawaii Promega 80 standard 1 1 1 1

Totals 397 335 33

*Details regarding the clones include total number produced, number of confirmed (detected in > 1 bird) variants and clones, as well as the number of clones sequenced. Blood was collected from experimentally-infected birds that survived infection between days 69–89 post-infection (PI) when parasitemias had reached chronic levels. Pectoral muscle was collected from experimentally-infected birds that succumbed to infection between days 16–26 PI when acute phase parasitemias were high.