Table 2.
EA4 women
|
AA5 women
|
EA4 men
|
||||||||
---|---|---|---|---|---|---|---|---|---|---|
SNP Id | Chr position1 | SNP location2 | EA MAF3 | AA MAF3 | Neck p-value | Spine p-value | Neck p-value | Spine p-value | Neck p-value | Spine p-value |
rs7477350 | 45,173,955 | 5′ | 0.38 | 0.29 | 0.21 | 0.15 | 0.69 | 0.97 | 0.94 | 0.41 |
rs7084793 | 45,185,085 | 5′ | 0.16 | 0.20 | 0.47 | 0.73 | 0.04 | 0.19 | 0.15 | 0.02 |
rs3824612 | 45,192,870 | Intron 1 | 0.38 | 0.09 | 0.45 | 0.26 | 0.95 | 0.77 | 0.64 | 1.00 |
rs7099684 | 45,217,161 | Intron 3 | 0.19 | 0.11 | 0.44 | 0.53 | 0.68 | 0.11 | 0.59 | 0.25 |
rs1369214 | 45,220,735 | Intron 3 | 0.47 | 0.50 | 0.80 | 0.35 | 0.72 | 0.36 | 0.96 | 0.69 |
rs2115819 | 45,221,095 | Intron 3 | 0.47 | 0.25 | 0.67 | 0.36 | 0.28 | 0.72 | 0.89 | 0.57 |
rs11239516 | 45,222,543 | Intron 3 | 0.14 | 0.14 | 0.39 | 0.45 | 0.49 | 0.87 | 0.43 | 0.70 |
rs7894352 | 45,222,918 | Intron 3 | 0.19 | 0.11 | 0.62 | 0.71 | 0.58 | 0.14 | 0.84 | 0.41 |
rs10900213 | 45,224,720 | Intron 3 | 0.44 | 0.41 | 0.34 | 0.44 | 0.20 | 0.72 | 0.78 | 0.94 |
rs10900215 | 45,227,460 | Intron 3 | 0.14 | 0.26 | 0.63 | 0.46 | 0.31 | 0.58 | 0.43 | 0.70 |
rs3780901 | 45,237,382 | Intron 4 | 0.31 | 0.39 | 0.83 | 0.99 | 0.85 | 0.17 | 0.30 | 0.006 |
rs2228065 | 45,240,512 | Exon 6 | 0.00 | 0.09 | N/A6 | N/A | 0.67 | 0.95 | N/A | N/A |
rs4540799 | 45,250,791 | Intron 7 | 0.30 | 0.12 | 0.29 | 0.22 | 0.58 | 0.30 | 0.13 | 0.08 |
rs2291427 | 45,256,230 | Intron 8 | 0.32 | 0.16 | 0.18 | 0.24 | 0.33 | 0.08 | 0.17 | 0.20 |
rs3802548 | 45,272,751 | 3′ | 0.25 | 0.22 | 0.59 | 0.59 | 0.92 | 0.47 | 0.06 | 0.05 |
Chromosome positions are based on NCBI Human Genome Assembly v. 36.2.
Position within or near gene.
Minor allele frequency.
European American.
African American.
N/A indicates result not available due to low minor allele frequency which invalidates the test of association.