Table 2.
Locus | Breed | Homozygote 0 | Heterozygote 1 | Homozygote 2 | ||||||
N1 | x2 | SE3 | N | x | SE | N | x | SE | ||
CAPN3 | ||||||||||
GG | GT | TT | ||||||||
c.53T>G | BRM4 | 62 | -0.02 | 0.10 | 238 | -0.11 | 0.05 | 314 | 0.08 | 0.05 |
c.53T>G | BEL5 | 26 | 0.06 | 0.12 | 203 | 0.10 | 0.05 | 609 | -0.02 | 0.03 |
c.53T>G | SGT6 | 22 | 0.05 | 0.14 | 203 | -0.06 | 0.05 | 405 | 0.04 | 0.04 |
GG | GT | TT | ||||||||
c.1538+225G>T | BRM | 153 | -0.10 | 0.06 | 279 | -0.02 | 0.05 | 134 | 0.19 | 0.08 |
c.1538+225G>T | BEL | 673 | 0.02 | 0.03 | 113 | -0.05 | 0.07 | 3 | 0.79 | 0.82 |
c.1538+225G>T | SGT | 371 | 0.04 | 0.04 | 213 | -0.00 | 0.05 | 32 | -0.18 | 0.08 |
CC | CG | GG | ||||||||
c.2443-103G>C | BRM | 58 | -0.06 | 0.10 | 209 | -0.10 | 0.05 | 295 | 0.08 | 0.05 |
c.2443-103G>C | BEL | 19 | 0.15 | 0.15 | 154 | 0.11 | 0.06 | 487 | -0.02 | 0.03 |
c.2443-103G>C | SGT | 19 | 0.03 | 0.13 | 134 | -0.05 | 0.06 | 393 | 0.04 | 0.04 |
CAST | ||||||||||
AA | AG | GG | ||||||||
c.2832A>G | BRM | 172 | -0.12 | 0.06 | 279 | -0.00 | 0.05 | 105 | 0.11 | 0.08 |
c.2832A>G | BEL | 379 | -0.06 | 0.04 | 239 | 0.16 | 0.05 | 28 | 0.18 | 0.16 |
c.2832A>G | SGT | 256 | -0.07 | 0.05 | 208 | 0.10 | 0.06 | 47 | 0.17 | 0.11 |
1Joint genotypes and phenotypes for genotype 0, 2 mean residual phenotype for genotype 0, 3 Standard error for the mean phenotype of genotype 0, 4 BRM Brahman, 5 BEL Belmont Red, 6 SGT Santa Gertrudis