Table 4.
Locus | Breed | p01 | Vr2 | a3kg | SEa4 | Pa5 | α6kg | SEα | Pα |
CAPN3 | |||||||||
c.53T>G | BRM7 | 0.29 | 0.0111 | -0.046 | 0.082 | 0.578 | -0.103 | 0.060 | 0.088 |
c.53T>G | BEL8 | 0.15 | 0.0043 | 0.037 | 0.057 | 0.520 | 0.089 | 0.044 | 0.046 |
c.53T>G | SGT9 | 0.20 | 0.0038 | 0.005 | 0.074 | 0.942 | -0.058 | 0.058 | 0.315 |
c.1538+225G>T | BRM | 0.52 | 0.0172 | -0.147 | 0.066 | 0.026 | -0.144 | 0.060 | 0.016 |
c.1538+225G>T | BEL | 0.92 | 0.0052 | -0.380 | 0.046 | 0.000† | 0.003 | 0.037 | 0.944 |
c.1538+225G>T | SGT | 0.78 | 0.0040 | 0.108 | 0.066 | 0.102 | 0.068 | 0.060 | 0.260 |
c.2443-103G>C | BRM | 0.29 | 0.0108 | -0.067 | 0.080 | 0.402 | -0.115 | 0.063 | 0.068 |
c.2443-103G>C | BEL | 0.15 | 0.0061 | 0.083 | 0.065 | 0.203 | 0.114 | 0.053 | 0.031 |
c.2443-103G>C | SGT | 0.16 | 0.0021 | -0.005 | 0.087 | 0.959 | -0.058 | 0.065 | 0.371 |
CAST | |||||||||
c.2832A>G | BRM | 0.56 | 0.0088 | -0.113 | 0.065 | 0.082 | -0.113 | 0.061 | 0.064 |
c.2832A>G | BEL | 0.77 | 0.0195 | -0.120 | 0.047 | 0.011 | -0.171 | 0.040 | 0.000† |
c.2832A>G | SGT | 0.70 | 0.0142 | -0.120 | 0.061 | 0.051 | -0.140 | 0.055 | 0.011 |
1Allele frequency for allele 0, 2 proportion of the residual variance explained by the SNP, 3 additive effect, 4 standard error of the additive effect, 5 P value of the additive effect, 6 allele substitution effect, 7 BRM Brahman, 8 BEL Belmont Red, 9 SGT Santa Gertrudis, † P < 0.0001