Table 2.

Genetic diversity within Denizli and Gerze subpopulations of Turkish native chickens

Locusa		Denizli breed				Gerze breed
		DHUC	DLHMAE	DOI	Total	GLHMAE	GOI	Total
ADL0102	bp	92–110	90–110	92–110	90–110	92–112	92–110	92–112
	N	3	4	2	5	4	3	5
	Ho	0.280	0.320	0.320	0.307	0.400	0.240	0.320
	He	0.308	0.460	0.274	0.348	0.440	0.431	0.432
	PIC	0.267	0.392	0.233	0.303	0.379	0.361	0.372
ADL0136	bp	127–157	125–155	127–155	125–157	127–157	129–159	127–159
	N	7	7	6	8	5	7	9
	Ho	0.520	0.480	0.640	0.547	0.360	0.480	0.420
	He	0.761	0.856	0.679	0.832	0.610	0.560	0.658
	PIC	0.708	0.818	0.629	0.804	0.540	0.514	0.591
ADL0158	bp	184–192	184–192	184–192	184–192	186	162–192	162–192
	N	4	4	4	4	1	3	3
	Ho	0.400	0.520	0.560	0.493	0.000	0.240	0.120
	He	0.549	0.670	0.566	0.685	0.000	0.222	0.116
	PIC	0.476	0.591	0.456	0.614	0.000	0.205	0.111
ADL0171	bp	85–105	93–105	85–105	85–105	95–125	99–125	95–125
	N	4	5	5	7	4	5	6
	Ho	0.280	0.280	0.360	0.307	0.240	0.400	0.320
	He	0.349	0.576	0.626	0.658	0.350	0.530	0.449
	PIC	0.318	0.524	0.578	0.603	0.322	0.460	0.407
ADL0172	bp	131–155	131–157	131–157	131–157	131–157	131–157	131–157
	N	6	5	7	7	4	4	4
	Ho	0.640	0.800	0.560	0.667	0.600	0.680	0.640
	He	0.701	0.734	0.750	0.734	0.562	0.617	0.585
	PIC	0.630	0.668	0.695	0.686	0.498	0.550	0.525
ADL0176	bp	183–201	183–201	183–201	183–201	181–201	181–201	181–201
	N	5	6	6	7	5	7	7
	Ho	0.600	0.640	0.320	0.520	0.320	0.240	0.280
	He	0.739	0.727	0.698	0.774	0.727	0.712	0.738
	PIC	0.679	0.664	0.629	0.729	0.665	0.662	0.691
ADL0181	bp	176–182	174–192	176–182	174–192	180	174–180	174–180
	N	4	6	4	7	1	2	2
	Ho	0.640	0.640	0.360	0.547	0.000	0.040	0.020
	He	0.657	0.650	0.663	0.653	0.000	0.115	0.059
	PIC	0.581	0.584	0.582	0.590	0.000	0.106	0.057
ADL0210	bp	118–126	118–126	118–126	118–126	118–126	102–126	102–126
	N	2	2	2	2	2	3	3
	Ho	0.440	0.600	0.480	0.507	0.480	0.560	0.520
	He	0.429	0.507	0.470	0.483	0.444	0.456	0.446
	PIC	0.332	0.373	0.355	0.365	0.341	0.364	0.352
ADL0267	bp	100–112	98–118	100–110	98–118	98–108	98–106	98–108
	N	6	6	4	8	5	4	5
	Ho	0.640	0.600	0.520	0.587	0.720	0.480	0.600
	He	0.667	0.709	0.676	0.715	0.732	0.725	0.726
	PIC	0.610	0.645	0.592	0.670	0.670	0.657	0.670
ADL0268	bp	93–113	93–113	107–113	93–113	107–113	93–113	93–113
	N	6	5	4	6	3	6	6
	Ho	0.680	0.400	0.720	0.600	0.520	0.600	0.560
	He	0.622	0.443	0.726	0.673	0.507	0.585	0.545
	PIC	0.572	0.414	0.659	0.627	0.437	0.525	0.489
Mean ± SE	N ± SE	4.7	4.4	5.0	6.1 ± 0.6	3.4	4.4	5.0 ± 0.7
	Ho ± SE	0.512	0.484	0.528	0.508 ± 0.037	0.354	0.421	0.380 ± 0.065
	He ± SE	0.578	0.613	0.633	0.656 ± 0.045	0.440	0.487	0.475 ± 0.074
	PIC ± SE	0.517	0.541	0.567	0.599 ± 0.049	0.385	0.440	0.426 ± 0.068

^abp, allele size range, in base pairs; N, number of alleles; Ho, observed heterozygosity; He, expected heterozygosity; PIC, polymorphism information content