Table 1.
Abundant tags for nuclear transcripts in the mouse kidney
| N | % | Tag | Databank entry |
|---|---|---|---|
| 355 | 2.92 | CATGACATCC | Plasma glutathione peroxidase (U13705)* |
| 189 | 1.55 | CTGGATGAGA | Kidney androgen-regulated protein (M22810)† |
| 135 | 1.11 | TGCATGCCCT | Ferritin light chain (J04716) |
| 132 | 1.09 | ATCGACACTT | 5.8S rRNA (K01367) |
| 69 | 0.57 | CCCACTTATG | Ferritin heavy chain (J03941) |
| 63 | 0.52 | AGCATTGAGC | Renal type II Na/Pi cotransporter (L33878)† |
| 60 | 0.49 | ACCAGGACCT | No match |
| 58 | 0.48 | GTGACTGGGT | Cytochrome c oxidase subunit IV (X54691) |
| 53 | 0.44 | TGACGTGCCG | Glyceraldehyde-3-phosphate dehydrogenase (M32599) |
| 47 | 0.39 | TCTACACGAA | Est 519201 5′ from mouse kidney (AA106199) |
| 42 | 0.35 | CCGTCAACTT | α-Globin (L75940) |
| 40 | 0.33 | GGGAAGTACG | Argininosuccinate synthetase (M31690)* |
| 38 | 0.31 | CTTAACTTCC | Na, K-ATPase γ-subunit (Q04646) |
| 38 | 0.31 | TAACTGTGGA | ESTs |
| 36 | 0.30 | CCACAGGTCT | Transcobalamin II (AF090686)* |
| 35 | 0.29 | AATGCCCTCA | Acidic ribosomal phosphoprotein P1 (U29402) |
| 34 | 0.28 | ATGTTATTCA | Cytochrome c oxidase subunit VIII precursor (U37721) |
| 34 | 0.28 | TGCAGAAGCG | Cellular glutathione peroxidase (X03920) |
| 31 | 0.25 | TGACTCCCTC | B2 repetitive sequence |
| 30 | 0.25 | ATCATGTTTA | ESTs, similar to rat aldolase B (M10149)* |
| 30 | 0.25 | CAGAAGCAGT | Endogenous murine leukemia virus sequence (L08395) |
| 29 | 0.24 | TATCTGCTGG | Cytochrome β-558 (M31775) |
| 27 | 0.22 | AGGATGACTG | Renal-specific organic cation transporter (AB005451)† |
| 26 | 0.21 | AATGATGAGG | Heat shock protein 70 (M19141) |
| 22 | 0.18 | AGGCAGTGTT | ESTs |
| 22 | 0.18 | TCATTATATA | EST, similar to human aspartoacylase (P45381) |
| 21 | 0.17 | CACATTGAGG | Ketohexokinase (Y09335) |
| 20 | 0.16 | AGCAAGCAGG | β-Actin (X03672) |
| 20 | 0.16 | AGGTGGTGAC | γ-Glutamyl transpeptidase (U30509)* |
| 20 | 0.16 | TGACGCCCTC | B2 repetitive sequence |
| 20 | 0.16 | TTGTTTGCCA | ESTs, similar to mouse H+ ATP synthase subunit c (L19737) |
The table lists tags detected ≥20 times (mitochondrial tags were excluded from the report) in the kidney SAGE library (12,154 tags sequenced). Note that several tags correspond to mRNAs enriched in the kidney proximal tubule (*) or specific (†) for this nephron portion. Additional data are available at http://www-dsv.cea.fr/thema/get/sade.html