Table 4. Mapping 3′ ESTs to the human genome reference sequences (HG18).
Total (%) | Poly A- | Poly A+ | Bimorphic | |
Total mapped 3′ EST | 13,467 | 2,984 | 4,898 | 5,585 |
Single mapped 3′ EST | 8,178 (100) | 2,113 (100) | 2,760 (100) | 3,305 (100) |
Intergenic mapping* | 2,310 (28) | 808 (38) | 751 (27) | 751 (23) |
Intragenic mapping | 5,868 (72) | 1,305 (62) | 2,009 (73) | 2,554 (77) |
Distribution of Intragenic mapping | ||||
Total | 5,868 (100) | 1,305 (100) | 2,009 (100) | 2,554 (100) |
Sense | 5,426 (93) | 1,123 (86) | 1,871 (93) | 2,432 (95) |
intron | 4,182 | 976 | 1,385 | 1,816 |
exon | 1,125 | 125 | 441 | 558 |
exon/intron | 127 | 22 | 45 | 58 |
Antisense | 442 (8) | 182 (14) | 138 (7) | 122 (5) |
intron | 385 | 175 | 113 | 95 |
exon | 24 | 5 | 5 | 13 |
exon/intron | 37 | 2 | 20 | 14 |
The mapping difference is at statistically significant level (p = 3.67×10 −16, X2 test).