Table 1. Fully sequenced Yersinia genomes analyzed for genome rearrangements.
Organism | Pathogenesis | Genome Size | dif | o | Accession | Ref |
Y. pestis Antiqua | Plague | 4,702,289 nt | 0.39 | + | CP000308 | [39] |
Y. pestis Nepal516 | Plague | 4,534,590 nt | 0.43 | + | CP000305 | [39] |
Y. pestis 15–70 (Pestoides F) | Plague | 4,517,345 nt | 0.77 | + | NC009381 | unpubl. |
Y. pestis CO92 | Plague | 4,653,728 nt | 0.55 | + | AL590842 | [54] |
Y. pestis KIM | Plague | 4,600,755 nt | 0.51 | + | AE009952 | [25] |
Y. pestis 91001 | avirulent | 4,595,065 nt | 0.50 | + | AE017042 | [78] |
Y. pseudotuberculosis IP 32954 | enterocolitis | 4,744,671 nt | 0.54 | + | BX936398 | [79] |
Y. pseudotuberculosis IP 31758 | enterocolitis | 4,721,828 nt | 0.46 | − | AAKT02000001 | [80] |
Y. enterocolitica 8081 | enterocolitis | 4,615,899 nt | 0.48 | + | AM286415 | [42] |
The reported genome size is the size of the primary circular chromosome without plasmids. The dif column indicates the approximate position of the replication terminus dif site, ranging between 0 and 1, where the origin of replication is at 0 and 1 on the circular chromosome. The o column indicates whether the origin and terminus dif site have the canonical relative orientation (+) or the inverse relative orientation (−): see text for details.