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. 2008 Jul 7;4:17. doi: 10.1186/1746-4811-4-17

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Copyright © 2008 Dare et al; licensee BioMed Central Ltd.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

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Occurrence of the PAP1 cis-regulatory element in the top 300 microarray selected genes. A 3 kb promoter fragment for each of the top 300 genes was analysed for the presence of PCEs using MAST. The average fold change from all microarrays was compared with the P-value obtained from the MAST analysis. Genes highlighted in green represent those genes that have a PCE and were transactivated by PAP1. Blue represents those that have a putative PCE but not in the first 1 kb tested. Yellow represents a gene with a PCE in the first 1 kb but was not transactivated. Red represents genes with no PCE and not transactivated. Grey represents untested genes.