Table 1.
(a) Oligonucleotide primers for real-time quantitative reverse transcription–polymerase chain reaction (RT–PCR); (b) oligonucleotide primers for RT–PCR.
cDNA | Primers | Annealing (°C) | Cycles | Product (bp) |
---|---|---|---|---|
(a) | ||||
RIG-I | Forward: 5′-GTGCAAAGCCTTGGCATGT-3′ | 55 | 40 | 115 |
Reverse: 5′-TGGCTTGGGATGTGGTCTACTC-3′ | ||||
GAPDH | Forward: 5′-GCACCGTCAAGGCTGAGAAC-3′ | 55 | 40 | 142 |
Reverse: 5′-ATGGTGGTGAAGACGCCAGT-3′ | ||||
(b) | ||||
RIG-I | Forward: 5′-GCA TATTGACTGGACGTGGCA-3′ | 60 | 30 | 644 |
Reverse: 5′-CAGTCATGGCTGCAGTTCTGTC-3′ | ||||
FSP-1 | Forward: 5′-AGCTTCTTGGGGAAAAGGAC-3′ | 60 | 30 | 200 |
Reverse: 5′-CCCCAACCACATCAGAGG-3′ | ||||
IP-10 | Forward: 5′-ACCTCCAGTCTCAGCACCATG-3′ | 60 | 30 | 761 |
Reverse: 5′- TGGGAGGATGGCAGTGGAAG-3′ | ||||
MIG | Forward: 5′-TTCCTCTTGGGCATCATCTTGCTG-3′ | 58 | 30 | 336 |
Reverse: 5′-GGTCTTTCAAGGATTGTAGGTGGA-3′ | ||||
GAPDH | Forward: 5′-CCACCCATGGCAAATTCCATGGCA-3′ | 60 | 30 | 598 |
Reverse: 5′-TCTAGACGGCAGGTCAGGTCCACC-3′ |
GAPDH, glyceraldehyde-3-phosphate dehydrogenase; IP-10, interferon-γ-inducible protein-10; FSP-1, fibroblast-specific protein-1; MIG, monokine induced by interferon-γ (MIG); RIG-I, retinoic acid-inducible gene-I; bp, base pairs.