Table 3. Haplotype frequencies with estimated standard deviations in parentheses.

Haplotype (rs10490924 + rs11200638)	Pooled sample	Case	Control
GG	0.412 (0.006)	0.277 (0.006)	0.679 (0.014)
GA	0.190 (0.005)	0.229 (0.006)	0.114 (0.006)
TG	0.124 (0.007)	0.143 (0.006)	0.087 (0.014)
TA	0.273 (0.005)	0.351 (0.007)	0.119 (0.005)

Haplotype frequencies for the LOC387715 and HTRA1 SNPs (with estimated standard deviations in parentheses) showing the presence of all four potential haplotypes in the cohort. P-value for independence between haplotypes and disease: 1.1e-22.