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. 2008 Aug 22;4(8):e1000133. doi: 10.1371/journal.ppat.1000133

Table 5. Amino acids at variable sites of the HA gene segment of A/H3N2 influenza viruses from the ‘N-lineage’, clade a, clade b, and singleton isolates s1, s2, s3, and s4 (Figure 6), with differing amino acids in bold.

HA site N-lineage s1 s2 s3 s4 Clade a Clade b
6 N N N N N N I
45 (C) S S S S N S S
48 (C) T T T T I T T
50 (C) G G E G G E G
53 (C) D D D D N D D
112 V V V V I V V
140 (A) K K K K K I K
142 (A*) R G R R R R G
144 (A) N D N N N N N
157 (B) L L L L L L S
173 (D) K K K K E K E
193 (B*) F F F F S F F
199 S S S S P S S
225 N N N N D N N
275 (C*) G G G G D G G
375 N N D N D D D
450 R R R R R K K

Antigenic sites are specified A–E (listed in parentheses) and sites that have been identified as undergoing positive selection denoted by an asterisk (*) [37].