Table II. mRNAs that are most highly enriched in CGH-1 IPs.
| ORF | Gene | CGH-1/IgG ratio | Baugh expressiona | Reinke germ line expressionb |
Protein domain/KOG classificationc |
|---|---|---|---|---|---|
| F39B2.11 | 8.6 | SMD | Translocase of outer mitochondrial membrane complex [KOG3028] |
||
| ZK1127.1 | nos-2 | 7.6 | SMD | Oogenesis-enriched | RNA-binding, germ line development |
| F52E1.1 | pos-1 | 6.9 | SMD | Oogenesis-enriched | Zn finger, posterior embryonic fate specification |
| C09G9.6 | oma-1 | 6.7 | SMD | Oogenesis-enriched | Zn finger, oocyte maturation |
| T20D3.8 | 6.5 | SMD | Oogenesis-enriched | Phosphatidylinositol biosynthesis [KOG3059] | |
| CD4.7 | 6.3 | MD | Oogenesis-enriched | Zn-finger protein [KOG3362] | |
| T21C9.13 | 6.2 | SMD | Oogenesis-enriched | Unknown | |
| T24D1.3 | 6.0 | SMD | Oogenesis-enriched | Unknown | |
| K10B2.3 | clec-88 | 6.0 | SMD | Oogenesis-enriched | C-type lectin [KOG4297] |
| F08F3.6 | 5.9 | SM | Oogenesis-enriched | Unknown, F-box containing | |
| C30B5.2 | 5.9 | MD | Leptin receptor gene-related protein [KOG2174] | ||
| F42A9.8 | 5.9 | SMD | Oogenesis-enriched | Unknown | |
| Y32F6A.1 | 5.8 | ME | Oogenesis-enriched | Unknown | |
| Y65B4BL.5 | 5.8 | ME | Oogenesis-enriched | Long-chain acyl-CoA synthetases (AMP-forming) [KOG1256] |
|
| C48B4.7 | 5.8 | SMD | Oogenesis-enriched | Unknown | |
| C17E4.5 | pab-3 | 5.8 | SMD | Oogenesis-enriched | Poly-A–binding protein [KOG4209] |
| F55A11.8 | 5.7 | SMD | Oogenesis-enriched | Unknown | |
| T19B10.7 | ima-1 | 5.7 | SMD | Oogenesis-enriched | Karyopherin (importin) α [KOG0166] |
| T21C9.4 | 5.5 | ME | Enhancer of rudimentary (cell cycle) [KOG1766] | ||
| C30F12.4 | 5.5 | SMD | Oogenesis-enriched | Unknown |
The CGH-1/IgG ratio indicates fold enrichment.
Microarray expression data from Baugh et al. (2001). MD, maternal degradation class (genes that are the subset of maternal genes that decrease without first increasing in abundance; ME, maternal-embryonic class (mRNAs with similar expression levels in pre- and postzygotic embryos); SMD, strictly maternal degradation class (genes are the subset of maternal degradation genes that are not also classified as embryonic).
Microarray expression data from (Reinke et al. (2004). Intrinsic, similar expression in gonads that produce either oocytes or sperm; Oogenesis-enriched, mRNAs that were more abundant during oogenesis than spermatogenesis.
Eukaryotic clusters of orthologous groups of proteins database classification. A complete list of CGH-1 associated mRNA is available in Table S2 (available at http://www.jcb.org/cgi/content/full/jcb.200801183/DC1).