Table 2. Primers used for the mutation analysis of the SLC4A11 gene.
|
Exon |
Sequence (5'-3') |
Annealing temperature (°C) |
Amplicon size (bp) |
| 2 |
F: ATTAAGGCTGGCTTCCCCTGCTATG |
67 |
303 |
| R: CCCTGGAGGCTTTTGCCCGACAAG |
|||
| 3&4 |
F: CCTTCCTGTGTGTGGCACTTTAACAG |
67 |
439 |
| R: ATCACCTCAGCCCCCAGGTAGAGG |
|||
| 5 |
F: ACCAGGCAGTGACAGCATCTCATAC |
67 |
354 |
| R: GGGTGGTGGGTCAACAGCCCCTC |
|||
| 6 |
F: GGGGGCGTTGGGAGGGGCTGTTGA |
67 |
201 |
| R: AGGGGACATGGGACACCCAGTTCCAC |
|||
| 7 |
F: GTCGGGGAGCCCCAGCTCCCTGG |
67 |
254 |
| R: GGACCCCAAGCAGAGGGCGGGTAA |
|||
| 8 |
F: CCCGGGCAGGGCCTCCTCTGTTTC |
67 |
328 |
| R: GACAGAGCGCCTGTTAGCCCTGTCC |
|||
| 9&10 |
F: TCGGCGGGGGCATGGGCCGGACA |
67 |
419 |
| R: AGCCCAGGGCCCAGCCCAGCATAC |
|||
| 11 |
F: TATGCTGGGCTGGGCCCTGGGCTG |
67 |
444 |
| R: GGGCTGAACCAGATCCCAAGCCTTGA |
|||
| 12 |
F: GGGGCTCAGGGAGGCCTCCCCCA |
67 |
210 |
| R: AGTGCAGAACCTCCCATCTCGGCTG |
|||
| 13 |
F: TCCAGGGCCTCCCCCTGCCACAC |
67 |
382 |
| R: GGGACAGCAGGTGCATGAGCACAGC |
|||
| 14 |
F: GAGGGGAGGGGCCGCATGGGTCAA |
67 |
239 |
| R: AGTAGGGGACAGGCTACTGCTATGCC |
|||
| 15 |
F: GGCGGTGGGTGACGTGGGGTAGC |
67 |
304 |
| R: CTCGTGGACAGAGCCCCACAGCAGA |
|||
| 16 |
F: CACCGGAGAACAGGTGTGGAGGGTG |
65 |
325 |
| R: GGCCAGAGGCTCCCCACTCCTCAG |
|||
| 17 |
F: GGAGGAGTGAGGCCCTGTGGACAGG |
67 |
340 |
| R: TGTGGGCGGCAGGGACCGGGTGTG |
|||
| 18 |
F: GGCGTGGGTGGGGACACAGCCCCA |
67 |
289 |
| R: CAGCCCGCCCATTCTCCACACCTAGA |
|||
| 19 | F: TGGGATGGGTGTCCACTGCCTTCTC |
67 |
199 |
| R: GCTCCAGAGCCAGCCTGGGAGGAC |
Primers were designed using genomic DNA and mRNA (GenBank NM_032034) sequences from the UCSC Genome Bioinformatics site. This mRNA does not have exon 1 sequences. Exon 1 was not analyzed as it is a part of the 5'-UTR.