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. 2008 Jul 28;9:67. doi: 10.1186/1471-2199-9-67

Table 2.

Primer sequences and optimum PCR conditions for amplifying the products

Gene Forward (5' to 3')
Reverse (5' to 3')
Product size (bp) Primer Used (nM) Annealing Temp (T°)
Actb TCCGCCGCCGGCCCACACT
AGTCCTTCTGGCCCATGC
188 0.40
0.40
60
Gapdh CAAGTTCCACGGCACGGTCA
CTCGGCACCAGCATCACCC
118 0.40
0.40
68
Hprt1 ACGTCGAGGACTTGGAAAGGGTGTT
GGCCTCCCATCTCCTTCATCACATC
96 0.40
0.40
68
H2afz AGAGCCGGCTGCCAGTTCC
CAGTCGCGCCCACACGTCC
85 0.20
0.33
59
Ubc GTGACACCATCGAGAAT
GACACCTCCCCTCAGAC
173 0.40
0.30
60
Ppia TCCAGGGTTTATGTGCCAGGGTG
CGTTTGCCATGGACAAGATGCC
137 0.30
0.30
68
Eef1e1 ACCGCAGAAGAGAAAGCCATAG
AGCGATGTAGCCCATAGTAGAGGA
190 0.50
0.50
68
G6pdx AGCCCGCCTCCACTGACTCC
ACCACGTTGTCCGCCTGCAC
88 0.40
0.30
60
Tbp GCTGAATATAATCCCAAGCGGTTTGC
AAATCAGCGCTGTGGTTCGTGGCTCTC
73 0.30
0.30
68
Polr2a AGACTTCTCGGCCCGCACTG
ACTTGGCGCCTGGGTACTGG
176 0.40
0.40
68
B2m GCTCCGTCTTGGGCTTG
CGGATGAAACCCAGATACATAG
152 0.33
0.33
60
Pgk1 TGTTGGTCGGGCGAAGCAG
CAGTGTCTCCACCGCCGATG
149 0.50
0.20
60
Ywhaz GGTCTGGCCCTTAACTTCTCTGTGTTCTA
GCGTGCTGTCTTTGTATGATTCTTCACTT
142 0.50
0.50
68
POU5F1 CGAGTGAGAGGCAACTTGG
CGGTTACAGAACCACACACG
125 0.45
0.20
57