Table 2. Recombinants detected in published complete mtDNA genome data.
| Recombinant (GenBank Acc. No.) | Haplogroup/Closest Relative | Fragment or Segment Involved | Deviant Segment | False Variants | |||
| Primary | Secondary | 1st PCR | 2nd or Direct PCR | Count | Score | ||
| NDsq0167 (AP008798) | F1a/NDsq0015 | M7a/NDsq0178 | E (11204-14141) | 7 | 13.0 | ||
| NDsq0168 (AP008799) | M7a/NDsq0178 | F1a/NDsq0015 | E (11204-14141) | 8 | 15.0 | ||
| NDsq0181 (AP008803) | M8a2a/Kong#WH6958 | D4b2b1/HNsq0221 | A (121-3036) | 3 | 6.0 | ||
| NDsq0116 (AP008776) | D4e2/JDsq0080 | D5b/TCsq0030 | D (8366-11330) | 5 | 10.0 | ||
| NDsq0117 (AP008777) | D5b/TCsq0030 | D4l/JDsq0100 | D (8366-11330) | 5 | 10.0 | ||
| ONsq0025 (AP008552) | B5a2/NDsq0126 | D4g1a/ONsq0035 | E (11204-14141) | 4 | 8.0 | ||
| GCsq0033 (AP008259) | D5a2a/PDsq0097 | A/TCsq0048 | 57-60 (15717-355) | 14 | 8.5 | ||
| TCsq0010 (AP008269) | M7a1b/TCsq0007 | B4c1c/ONsq0039 | A (121-3036), B (2885-5782), C (5623-8482), E (11204-14141) | 30 | 16* | 28.0* | |
| TCsq0019 (AP008278) | D4j/NDsq0124 | M7b2/NDsq0165 | B (2885-5782) | 11,18 | 6 | 11.0 | |
| Young#BJ109 (N.A.) | D4b2b/Macaulay#2 | M10a1/Kong#YN163 | No. 6, 18, 19, 22 according to [45] | 21 | 10 | 18.0 |
Note: The first nine cases are drawn from [37] and the last one from [46]. The samples employed for comparison are from [37], except two from [10], [13]. The readable regions of the segments mentioned for the first nine cases are as follows [44]: 11 (2885-3284), 18 (4848-5247), 21 (5623-6022), 30 (8083-8482), 57 (15717-16116), 58 (15969-16368), 59 (16221-51), and 60 (16525-355). False mutations are rated with respect to the primary classification except when the secondary classification gave a smaller score (indicated by an asterisk). N.A. = not available.