. Author manuscript; available in PMC: 2009 Jul 1.

Published in final edited form as: J Proteome Res. 2008 May 29;7(7):2703–2711. doi: 10.1021/pr700780x

Table 2.

Naturally processed Vaccinia peptides eluted from MHC DR1 molecules belong to proteins that are highly conserved across the poxviridae family.

Name	Protein function/location	MVA gene name	MW [kDa]	Sequence conservation
Name	Protein function/location	MVA gene name	MW [kDa]	vaccinia strains	pox family
I6L	Telomere binding protein	MVA067L	43.5	AC, AK, CP, DU, LS, TT, WR; 3737, LC10M8, LC16MO	VARV, CPXV, MPXV, HSPV, CMLV, EMV, TATV, RPXV
D6R	Early transcription factor, VETF-1	MVA103R	70	AC, AK, CP, LS, TT, WR; 3737, LC10M8, LC16MO	VARV, CPXV, MPXV, HSPV, CMLV, EMV, TATV, RPXV, DEXV, SWPX, SHPX, CNPX
A10L	Major core protein 4a	MVA121L	102.2	AC, AK, LS, 3737	VARV, CPXV, HSPV, CMLV, TATV

AC - Acambis; AN - Ankara; CP — Copenhagen; TT — Tian Tan; LS — Lister; DU — DUKE; VARV — variola; HSPX — horsepox; CPXV — cowpox; MPXV — monkeypox; CMLV — camelpox; TATV — taterapox; RPXV — rabbitpox; EMV — ectromelia; SWPX — swinepox; DEXV — deerpox; SHPX — sheeppox; CNPX — Canarypox;