Table 2.
Estimated occupancy of interdomain contacts at 310 K based on WHAM analysis of replica exchange MD trajectories
Residues | Site | Gly frequency | ACPC frequency | Mutant | Kd(mut)/Kd(wt) |
---|---|---|---|---|---|
T614-E799 | (1) | 0.812 | 0.821 | T614A | >5 × 104 |
K609-E803 | (2) | 0.423 | 0.079 | E803A | 2.5 |
N635-D804 | (3) | 0.058 | 0.061 | N635S | 5.6 |
N635-S801 | (4) | 0.833 | 0.661 | N635S | 5.6 |
S801-E871 | (5a) | 0.012 | 0.011 | S801A | 9.7 |
S633-S801 | (5b) | 0.005 | 0.038 | S801A | 9.7 |
D845-Y873 | (6) | 0.944 | 0.998 | Y873F | 25 |
E522-T825 | (7a) | 0.837 | 0.957 | T825A | 7.3 |
E522-T825 | (7b) | 0.691 | 0.870 | Y605F | 10.1 |
A847-Y908 | (8) | 0.570 | 0.655 | ND | ND |
Numbers in parentheses refer to the labelling in Figure 4. |