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. Author manuscript; available in PMC: 2008 Aug 17.
Published in final edited form as: J Am Chem Soc. 2007 Feb 28;129(11):3135–3147. doi: 10.1021/ja0654074

Table 1.

Selected distances between irons and atoms in their first coordination sphere for our QM/MM model of the reduced form: MMOHred and the experimental structure.a

Distance (Å) Model QM/MM Model QM Crystal protomer β Deviation QMMM/Protomer β Deviation QM/Protomer β Deviation QMMM/QM Deviation Protomer β/Protomer α
Fe2-Fe1 3.289 3.636 3.267 0.022 0.369 −0.347 −0.046
O3-Fe1 2.047 2.120 2.064 −0.017 0.056 −0.073 −0.069
O5-Fe1 2.039 2.066 2.283 −0.244 −0.217 −0.027 0.051
N7-Fe1 2.158 2.219 2.196 −0.038 0.023 −0.061 −0.083
O11-Fe1 2.475 2.246 2.315 0.160 −0.069 0.229 −0.126
O13-Fe1 2.109 2.140 2.184 −0.075 −0.044 −0.031 −0.301
O14-Fe1 2.312 2.346 2.528 −0.216 −0.182 −0.034 0.148
O6-Fe2 2.097 2.098 2.295 −0.198 −0.197 −0.001 0.015
O8-Fe2 1.950 1.964 2.070 −0.120 −0.106 −0.014 0.073
O10-Fe2 2.220 2.292 2.366 −0.146 −0.074 −0.072 −0.071
O11-Fe2 2.265 2.163 2.262 0.003 −0.099 0.102 −0.188
N12-Fe2 2.110 2.148 2.162 −0.052 −0.014 −0.038 −0.008
O14-Fe2 2.910 3.201 2.654 0.256 0.547 −0.291 −0.022
RMSD (A) 0.147 0.213 0.148 0.121