Table 1.
(a) Mutant Entry Id. | TP | FP | FN | P | R | F | |
---|---|---|---|---|---|---|---|
1 | MutationFinder | 2690 | 1499 | 5263 | 0.642 | 0.338 | 0.443 |
2 | MutationFinder + validation | 1665 | 396 | 6288 | 0.808 | 0.209 | 0.333 |
3 | Alignment | 6079 | 3728 | 1874 | 0.620 | 0.764 | 0.685 |
4 | Alignment + validation | 4104 | 2549 | 3849 | 0.617 | 0.516 | 0.562 |
5 | 2 and 3 | 1403 | 275 | 6550 | 0.836 | 0.176 | 0.291 |
6 | 2 or 3 | 6258 | 3816 | 1695 | 0.621 | 0.787 | 0.694 |
(b) Normalized Mutations | TP | FP | FN | P | R | F | |
---|---|---|---|---|---|---|---|
1 | MutationFinder | 2575 | 7050 | 7929 | 0.268 | 0.245 | 0.256 |
2 | MutationFinder + validation | 1803 | 799 | 8701 | 0.693 | 0.172 | 0.275 |
3 | Alignment | 7681 | 15404 | 2823 | 0.333 | 0.731 | 0.457 |
4 | Alignment + validation | 5059 | 9225 | 5455 | 0.354 | 0.482 | 0.408 |
5 | 2 and 3 | 1584 | 532 | 8920 | 0.749 | 0.151 | 0.251 |
6 | 2 or 3 | 7900 | 15671 | 2604 | 0.335 | 0.752 | 0.464 |