Table 3.

Posterior estimates of divergence times.

Node	Unpartitioned				Partitioned
	BEAST		mcmctree		mcmctree
	Mean	95% HPD	Mean	95% HPD	Mean	95% HPD
t1	35.69	26.55–46.51	36.59	30.71–42.63	36.49	31.20–47.40
t2	19.09	14.38–24.79	22.05	18.37–25.57	17.88	15.13–23.23
t3	12.86	9.77–16.58	15.57	12.93–17.99	12.36	10.44–15.97
t4	5.39	4.20–6.86	6.31	5.23–7.14	4.88	4.17–6.37
t5	5.05	3.90–6.48	5.80	4.81–6.64	4.55	3.85–5.99
t6	2.75	2.10–3.57	3.11	2.55–3.63	2.41	2.01–3.23
t7	0.88	0.66–1.17	0.97	0.78–1.16	0.75	0.61–1.00
t8	4.58	3.51–5.89	5.31	4.39–6.11	4.11	3.44–5.38
t9	4.08	3.11–5.27	4.69	3.86–5.43	3.66	3.07–4.84
t10	5.66	4.26–7.34	6.98	5.73–8.18	5.33	4.43–7.00
rate	1.199	0.896–1.50	1.07	0.92–1.28	AF	AF
κ	-	-	35.72	33.01–38.63	AF	AF
α	0.155	0.146–0.163	0.20	0.19–0.21	AF	AF

The two mcmctree columns correspond to the unpartitioned and partitioned analyses. The divergence time estimates are in millions of years before present. HPD, highest posterior density; rate, evolutionary rate (× 10^-8 substitutions/site/year); κ, transition-transversion parameter of the HKY model; α, shape parameter of the rate heterogeneity Γ-distribution. AF, see Additional File 1.