Table 4.
Nucleotide Homology in Noncoding Elements – M. terricolor vs. M. m. domesticus (C57BL/6J; # AY172335).
| Gene | Position in AY172335 (M. m. domesticus) |
±Position in M. terricolor |
Changes in M. terricolor |
% Nucleotide Identity |
|---|---|---|---|---|
| D-loop (overall) | 15423–16299 877 nt |
15422–16310 889 nt |
112 base substitutions 16 insertions, 4 deletions |
85% |
| ETAS 1 | 15445–15504 60 nt |
15445–15504 60 nt |
4 substitutions 7 insertions or deletions |
82% |
| ETAS 2 | 15509–15571 63 nt |
15509–15571 63 nt |
8 substitutions 12 insertions or deletions |
68% |
| CSB I | 16029–16053 25 nt |
16029–16053 25 nt |
0 changes |
100% |
| CSB II | 16084–16100 17 nt |
16084–16100 17 nt |
2 insertions or deletions |
88% |
| CSB III | 16109–16126 18 nt |
16109–16126 18 nt |
0 changes |
100% |
| L-strand Origin of Replication | 5160–5191 32 nt |
0 changes` |
100% |
Abbreviations: ETAS, Extended Termination-Associated Sequences; CSB, Conserved Sequence Block.