TABLE 9.
Characterization of dynamic changes in a domestic drain microcosm on the basis of sequences of dominant PCR amplicons derived from DGGE gels
| Band | Closest relative (% sequence similarity)a | Sequence length (bp)b |
|---|---|---|
| a | Flectobacillus sp. strain AY308840 (97) | 173 (13) |
| b | Flectobacillus sp. strain AY423898 (100) | 176 (3) |
| c | Herminiimonas arsenicoxydans CU207211 (61) | 185 (0) |
| d | Deinococcus cellulolytica DQ883809 (80) | 175 (5) |
| e | Flectobacillus sp. strain AY30884085 (98) | 177 (0) |
| f | Bacteroidetes strain AY509355 (100) | 180 (3) |
| g | Burkholderia xenovorans AB186240 (71) | 179 (2) |
| h | Chryseobacterium sp. strain AY779536 (89) | 181 (2) |
| i | Herbaspirillum sp. strain AY766356 (96) | 176 (2) |
| j | Microscilla sp. strain AY849869 (96) | 180 (1) |
| k | Cytophaga sp. strain AF125326 (100) | 180 (1) |
| l | Deinococcus sp. strain AY826637 (72) | 190 (2) |
| m | Flavobacterium sp. strain AJ508710 (72) | 180 (2) |
| n | Arcicella sp. strain AJ746140 (80) | 187 (2) |
| o | Cupriavidus necator AB015605 (100) | 180 (3) |
a
Based on EMBL database searches.
b
The number of ambiguous bases are given in parenthesis.