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. 2008 May 16;74(15):4898–4909. doi: 10.1128/AEM.02884-07

TABLE 2.

Comparison of NCBI and RDP taxonomic designations for Actinobacteria, Bacteroidetes, and Firmicutes sequences obtained from subjects with BV (n = 580)

NCBI designation No. of sequences for RDP designation:
Total
Actinobacteria
Bacteroidetes
Firmicutes
Atopobium Coriobacteriaceae Eggerthella Gardnerella Mobiluncus Olsenella Slackia Porphyromonas Tannerella Prevotella Acetivibrio Lachnospiraceae Shuttleworthia
Actinobacteria
    Atopobium 4 9 12 25
    Bifidobacterium 110 110
    Coriobacteriaceae 4 2 6
    Eggerthella 10 4 14
    Gardnerella 8 8
    Mobiluncus 5 5
    Olsenella 20 17 37
    Slackia 2 4 4 10
Bacteroidetes
    Bacteroidales 3 3
    Porphyromonas 24 24
    Prevotella 171 171
Firmicutes
    Acetivibrio 1 1
    Butyvibrio 1 1
    Clostridium 34 34
    Eubacterium 14 14
    Lachnospira 1 2 3
    Lachnospiraceae 7 7
    Roseburia 3 3
    Ruminococcus 1 1
    Shuttleworthia 76 76
    OTU_171 3 1 18 5 27
Total 6 47 6 118 5 29 4 24 3 175 60 25 78 580