TABLE 3.
Validation with clinical specimensa
Specimen ID | PCR result
|
Sequence confirmation result | Blinded result | |||
---|---|---|---|---|---|---|
Paramyxovirinae | Rubulavirus- Avulavirus subgroup | Respirovirus- Morbillivirus- Henipavirus subgroup | Pneumovirinae | |||
2005495091 | Pos | Neg | Pos | Neg | HPIV3 | HPIV3 |
2005495105 | Pos | Neg | Pos | Neg | HPIV3 | HPIV3 |
2005495106 | Pos | Neg | Pos | Neg | HPIV3 | HPIV3 |
2002023415 | Neg | Neg | Neg | Pos | hRSV-B1 | hRSV-B1c |
2002023422 | Neg | Neg | Neg | Pos | hRSV-B1 | hRSV-B1 |
2002023428 | Neg | Neg | Neg | Neg | Neg | FLU A |
2002023434 | Neg | Neg | Neg | Neg | Neg | FLU A |
2002023436 | Pos | Neg | Pos | Neg | HPIV3 | HPIV3 |
2002023437 | Pos | Neg | Pos | Neg | HPIV3 | HPIV3 |
2002023644b | Neg | Neg | Neg | Neg | Neg | HMPV |
2002029001 | Neg | Neg | Neg | Pos | HMPV | HMPV |
2002029002 | Neg | Neg | Neg | Pos | HMPV | HMPV |
Pos, positive; Neg, negative. For other abbreviations, see Table 1.
The specimen 2002023644 had a low viral load (<10 copies/5 μl template) which is below the detection limit of the pan-Pneumovirinae RT-PCR.
hRSV-B1, human RSV-B1.