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. 2008 Jun 27;190(17):5898–5906. doi: 10.1128/JB.00643-08

TABLE 1.

Oligonucleotides used for amplification and cloning of the corresponding genes

Primer Sequencea Restriction site Application
ggpS univ 5A AARGAAGCCTTYTGGCC Cloning of internal ggpPS fragments
ggpS univ 3A GTGTGGTGGAARAAGGC
AvXcPa AS 63 ACCGGCCGCAGCCTGGAA
AvXcPa AS 111 CGCCGCTGCTCCTAYTTCTGC
AvXcPa AS 139 CGCCGCTGCTCCTAYTTCTGC
ggpSD5o TGCGGTTGACCTTCAGGA
ggpS3i TTTCAGGTCCGGGCGCAGTT Inverse PCR of 3′ end of ggpPS
tps univ 5A TTTTTTYTGCACATYCC Cloning of the partial tps gene
tps univ 3A ATGAACYTGGTGGCCAA
ggp5C TTYCTGCACACCCCSTTYCC
ggpS5i ATGATGCATGTGTTCTGGGA Labeling of the ggpPS probe
GgpS5′Xho CTCGAGTTGACTGTATCGACA XhoI Cloning of the complete ggpPS gene into expression vector
ggpS3′Hind AAGCTTTCAACCGCGCACCGC HindIII
ggpS5′AS284 CTCGAGGCCGGCGCTGACCTG XhoI Cloning of the truncated ggpPS gene
Syn_compl.5′ GGGTACCATGAATTCATCCCTTGTGAT KpnI Amplification of ggpS from Synechocystis sp. strain PCC 6803
Syn_compl.3′ GTCTAGACTACATTTGGGGGGGCTCTC XbaI
SF_compl.5′ GGGTACCATGACTGTATCGACACCCTCT KpnI Amplification of full-length ggpPS and its truncated version from S. rhizophila for complementation
Sk_compl.5′ GGGTACCATGGGCGCTGACCTGGTGATG KpnI
SF_compl.3′ GGAGCTCTCAACCGCGCACCGCCTCCA SacI
proggpS-5′ GGGGTACCTCCAGGCATATTAGTTCA KpnI Amplification of the ggpS (strain PCC 6803) promoter region from nucleotide −193 to +495 (20)
proggpS-3′ (1027-KpnI) GGGTACCATTCATAAAATCAGCGG KpnI
a

Added restriction sites are underlined.