TABLE 3.
Pairwise distance matrix between groups of subtypes for the CA region
| CA subtypea | % Distance
|
|||||||
|---|---|---|---|---|---|---|---|---|
| Sub A | Sub B JP | Sub B BR | Sub C | Sub C TI | Sub D | Sub E | Pallas' cat | |
| Sub A | ||||||||
| Sub B JP | 17.20 | |||||||
| Sub B BR | 17.90 | 2.20 | ||||||
| Sub C | 16.30 | 20.20 | 19.80 | |||||
| Sub C TI | 18.70 | 18.10 | 17.40 | 16.90 | ||||
| Sub D | 18.60 | 17.70 | 17.10 | 18.60 | 16.30 | |||
| Sub E | 17.40 | 9.20 | 9.20 | 19.60 | 19.40 | 15.70 | ||
| Pallas' cat | 32.90 | 41.40 | 39.70 | 30.80 | 34.30 | 36.70 | 38.10 | |
| Sub B US | 17.20 | 1.40 | 2.00 | 19.80 | 17.40 | 17.00 | 9.10 | 41.00 |
a
Sub A, subtype A (Petaluma, PPR, and Sendai1); Sub B JP, subtype B from Japan (Sendai2, TM2, Yokohama, Aomori1, and Aomori2); Sub B US, subtype B from the United States (USIL2489_7B); Sub B BR, subtype B from Brazil (RJ01, RJ02, RJ03, RJ04, RJ05, RJ06, RJ07, RJ08, RJ09, RJ10, RJ11, RJ12, RJ13, RJ14, RJ15, RJ16, RJ17, RJ18, RJ19, RJ20, RJ21, RJ22, RJ23, RJ24, RJ34, and RJ35); Sub C, subtype C from Canada (C and C36); Sub C TI, subtype C from Taiwan (Ti1 and Ti3); Sub D, subtype D (Shizuoka and Fukuoka); Sub E, subtype E (LP20E, LP24E, and LP3E); Pallas' cat, Pallas' cat selvage isolate.