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. 2008 Jun 5;295(2):G348–G356. doi: 10.1152/ajpgi.00079.2008

Table 1.

Oligonucleotides designed from genes of interest and utilized for real-time PCR

Protein Gene ID Reference Sequence mRNA Coordinates Primer 5′-oligonucleotide sequence-3′ Amplicon Size, bp
NHE1 Slc9a1 NM_012652 1992–2011 Forward CACCAGTGGAACTGGACCTT 211
2202–2183 Reverse ACATGGGGAAGTGCTTCTTG
NHE2 Slc9a2 NM_012653 2173–2192 Forward CGCAGGGCTTCTACTTCAAC 235
2407–2388 Reverse CGTCCACCTCATTCTTCCAT
NHE3 Slc9a3 NM_012654 1885–1905 Forward GGAACAGAGGCGGAGGAGCAT 322
2206–2187 Reverse GAAGTTGTGTGCCAGATTCT
ENaC-α Scnn1a NM_031548 1443–1462 Forward TACCCTAAGCCCAAGGGAGT 226
1668–1649 Reverse TGTTCTGCAAGGACAGCATC
ENaC-β Scnn1b NM_012648 1505–1524 Forward ACCCTGAGCAGGAAGGGTAT 222
1726–1707 Reverse ACAGGAGGCCACTAGCTTGA
ENaC-γ Scnn1 g NM_017046 680–699 Forward GCACGTTCATGAGTCGAAGA 206
885–866 Reverse AGAAGCAGGTCACCAGCAGT
Na+/K+-ATPase Atp1a1 NM_012504 3207–3231 Forward TGCCTTCCCCTACTCCCTTCTCATC 323
    (α 1 subunit) 3529–3505 Reverse CTTCCCCGCTGTCGTCCCCGTCCAC
AT1 Agtr1a NM_030985 392–411 Forward GGAAACAGCTTGGTGGTGAT 241
632–614 Reverse CGATGCTGAGACACGTGAG
AT2 Agtr2 NM_012494 252–272 Forward CAATCTGGCTGTGGCTGACTT 101
352–331 Reverse TGCACATCACAGGTCCAAAGAG
GAPDH Gapd NM_017008 1270–1289 Forward TCCCTCAAGATTGTCAGCAA 308
1577–1558 Reverse AGATCCACAACGGATACATT

NHE, sodium-hydrogen exchanger; ENaC, epithelial sodium channel.