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. 2008 Sep;19(9):3997–4005. doi: 10.1091/mbc.E07-11-1186

Table 2.

Sodium bisulfite genomic sequencing primer sets

Primer pair Sequence Amplicon location
En-4998S 5′-GAATTTTTAGTATTTTAGAAGT-3′ Enhancer
En-45944AS 5′-CCCTACCTTCCCTCTCAA-3′ −4998 to −4544
En-4941S 5′-TTT GTA ATT TGG AAG TTG AGT AA-3′
En-4554AS 5′-CCTCTCAAACCAAAATACTCTACAA-3′ −4941 to −4554
Pr-1295S 5′-GGTAGTAGGGTATATTAGTGTTTAGG-3′ Promoter
Pr-860AS 5′-AATACACCAACACTCTCCAAACA-3′ −1295 to −860
Pr-1211S 5′-TGGTGTGATTTTAGAGTTTTGAGTAT-3′
Pr-880AS 5′-AACACTTCAAACCAAAATACATAC-3′ −1211 to −880
Pr-965S 5′-GATTAGATGTTTAGTTAGTGGTT-3′
Pr-583AS 5′-TTATCCTTAAATCTAACATTAA-3′ −965 to −583
Pr-884S 5′-AGTGTTTGGAGAGTGTTGGTGTATT-3′
Pr-617AS 5′-CCTCCCAACCCCAATTTCCTAA-3′ −884 to −617
Pr-538S 5′-AAGGATTTAAGGGTGGGGATT-3′
Pr-74AS 5′-AACTCTCCAATACTAACCCTC-3′ −538 to −74
Pr-484S 5′-GAGAGAATTTGTATGATTTTAGAGGTT-3′
Pr-145AS 5′-AACTCTAAAACCTCAACTCCAC-3′ −484 to −145
Pr-346S 5′-GTGTTATATTATAGAAGGATTTTTATG-3′
Pr-286S 5′-TGTTTTAGTTTTTATGTTGTAGTTTTAG-3′
Pr+3AS 5′-ACTACCTACTCCAACAAAACCCTAACC-3′ −286 to +3
+4381S 5′-TCACCCATCCCACCCCTGCACCCTT-3′
+5066AS 5′-GCGCCCGGGTCTCTCAGTCGCTGG-3′ +4381 to +5066
HHS Vulnerability Disclosure