Table II.
Position, nucleotide variation, primer and probe sequences of seven SNPs within CYP1B1
SNP | dbSNP ID | Location | Chromosome position | AA change | Alleles | F and R primer sequences | Probe sequences |
−1001C/T | rs2567206 | Promoter | 38215182 | C/T | F: GGTAACCGCGCTTCATCAC | CTCCAATCA/GAGGCCG | |
R: TGTACCGAGCGTGGTTCTG | |||||||
−263G/A | rs2551188 | Intron 1 | 38214445 | A/G | F: CGCAAGGCGCGTAACG | TCCCCAG/AATTGCA | |
R: CGCCACCGCCTCGAT | |||||||
−13C/T | rs2617266 | Intron 1 | 38214195 | C/T | F: CTGCACCCCTGAGTGTCA | CCTTCTCCTC/TTCTGTCC | |
R: GGCTGGTGCCCATGCT | |||||||
142C/G (R48G) | rs10012 | Exon 2 | 38214041 | Arg/Gly | C/G | F: GCTGCTGAGGCAACGGA | CAGCTCC/GGGTCCGC |
R: CAGTGGCCACGCAAACG | |||||||
355G/T (A119S) | rs1056827 | Exon 2 | 38213828 | Ala/Ser | G/T | F: AGACCACGCTCCTGCTACTC | |
R: GAACTCTTCGTTGTGGCTGA | |||||||
4326C/G(L432V) | rs1056836 | Exon 3 | 38209854 | Leu/Val | C/G | F: TGTCAACCAGTGGTCTGTGAATC | ATGACCCAC/GTGAAGTG |
R: TGGATCAAAGTTCTCCGGGTTA | |||||||
4390A/G(N453S) | rs1800440 | Exon 3 | 38209790 | Asn/Ser | A/G | F: ACTTTGATCCAGCTCGATTCTTG | CTCATCAG/ACAAGGAC |
R: CGCCTTTTGCCCACTGAA |
F, forward; R, reverse.