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. Author manuscript; available in PMC: 2008 Sep 2.
Published in final edited form as: Biochemistry. 2007 May 3;46(21):6340–6352. doi: 10.1021/bi062088k

Table 5.

ITC-determined thermodynamic binding parameters for PDZ3 and KKETEV-derived peptides. a The underlined residues indicate changes with respect to the parent peptide, KKETEV.

peptide Kd (μM) ΔG (kcal/mol) ΔH (kcal/mol) TΔS (kcal/mol)
1 KETEV 18 ± 1 −6.5 ± 0.1 −4.3 ± 0.3 2.2 ± 0.3
2 KKETEV 1.9 ± 0.1 −7.8 ± 0.1 −6.2 ± 0.1 1.6 ± 0.1
3 KKKETEV 1.3 ± 0.1 −8.0 ± 0.1 −5.9 ± 0.3 2.1 ± 0.2
4 KKETEA 91 ± 2 −5.5 ± 0.1 −4.6 ± 0.2 0.9 ± 0.2
5 KKETEL 7.9 ± 1.3 −7.0 ± 0.1 −4.1 ± 0.3 2.9 ± 0.2
6 KKETEI 7.7 ± 1.2 −7.0 ± 0.1 −4.3 ± 0.2 2.7 ± 0.1
7 KKETEM 21 ± 2 −6.4 ± 0.1 −6.8 ±± 0.2 −0.4 ± 0.1
8 b KKETEF 57 ± 2 −5.8 ± 0.1 −4.4 ± 0.4 1.4 ± 0.4
9 KKETET 105 ± 6 −5.4 ± 0.1 −5.9 ± 0.2 −0.5 ± 0.2
10 KKESEV 6.6 ± 0.9 −7.1 ± 0.1 −4.8 ± 0.1 2.3 ± 0.2
11 KKECEV 72 ± 7 −5.7 ± 0.1 −1.7 ± 0.1 4.0 ± 0.2
12 KKESEL 33 ± 2 −6.1 ± 0.1 −4.0 ± 0.1 2.1 ± 0.1
13 KKESEI 24 ± 6 −6.3 ± 0.2 −5.0 ± 0.2 1.3 ± 0.4
14 b KKESEF 98 ± 16 −5.5 ± 0.1 −3.1 ± 0.1 2.4 ± 0.1
15 KKETGV 2.4 ± 0.0 −7.7 ± 0.1 −5.7 ± 0.2 2.0 ± 0.2
16 KKETAV 0.45 ± 0.10 −8.7± 0.1 −5.3 ± 0.4 3.4 ± 0.4
17 KKETVV 1.3 ± 0.2 −8.1 ± 0.1 −5.9 ± 0.1 2.2 ± 0.1
18 KKETLV 1.8 ± 0.3 −7.8 ± 0.1 −3.7 ± 0.4 4.1 ± 0.3
19 KKETPV 0.95 ± 0.15 −8.2 ± 0.1 −4.3 ± 0.1 3.9 ± 0.2
20 KKETWV 2.8 ± 0.4 −7.6 ± 0.1 −3.5 ± 0.2 4.1 ± 0.1
21 KKETDV 20 ± 2 −6.4 ± 0.1 −4.1 ± 0.3 2.3 ± 0.3
22 KKETKV 1.2 ± 0.0 −8.1 ± 0.1 −5.6 ± 0.6 2.5 ± 0.6
23 KKGTEV 80 ± 3 −5.6 ± 0.1 −2.7 ± 0.1 2.9 ± 0.1
24 KKATEV 21 ± 4 −6.4 ± 0.1 −2.4 ± 0.1 4.0 ± 0.2
25 KKQTEV 4.0 ± 0.0 −7.4 ± 0.1 −4.9 ± 0.3 2.5 ± 0.3
26 KKDTEV 85 ± 12 −5.6 ± 0.1 −3.9 ± 0.3 1.7 ± 0.2
27 KKKTEV 27 ± 4 −6.2 ± 0.1 −2.7 ± 0.3 3.5 ± 0.4
28 b KKGTGV 273 ± 30 −4.9 ± 0.1 −2.6 ± 0.3 2.3 ± 0.2
29 KKATAV 8.3 ± 1.5 −6.9 ± 0.1 −3.0 ± 0.1 3.9 ± 0.2
30 YKETEV 1.2 ± 0.1 −8.1 ± 0.1 −6.9 ± 0.1 1.2 ± 0.2
a

Values are the arithmetic mean of at least two independent experiments. All c values measured between 1 and 237. Stoichiometric (n) values ranged from 0.85 to 1.21.

b

ITC was conducted as a competitive experiment.