Skip to main content
. 2008 Aug 7;9:333. doi: 10.1186/1471-2105-9-333

Table 1.

Sliding window size and OU pattern types (oligomer lengths) selected for sequences of different length present in the SeqWord database.

Sequence length Sliding window Step OU pattern type
> 2 Mbp 8 kbp 2 kbp 4 mer
from 1 mbp to 2 Mbp 5 kbp 0.5 kbp 4 mer
from 0.5 mbp to 1 Mbp 3 kbp 0.3 kbp 3 mer
< 0.5 Mbp 1.5 kbp 0.15 kbp 3 mer