TABLE 1. Oligonucleotide sequence of primers used in PCR amplifications.
Name | Sequence | Location of sequence |
---|---|---|
185F | 5′-CTC AAG GAG AAC TGAa GGC GCC AGA CTG-3′ | nt 612-638 of apoA-I cDNAb (sense) (amino acids +181 to +189) |
185R | 5′-CAG TCT GGC GCC TCA GTT CTC CTT GAG-3′ | nt 638-612 (antisense) (amino acids +189 to +181)c |
M32S | 5′-CTG GCC GCGd TAC GCC GCC GCG GCC ACC GAG-3′ | nt 638-665 of apoA-I cDNA (sense) (amino acids +189 to +198) |
M32A | 5′-CTC GGT GGC CGC GGC GGC GTA CGC GGC CAG TCT-3′ | nt 665-633 of apoA-I cDNA (antisense) (amino acids +198 to +188) |
AINOT F | 5′ CCT CCG CGG ACA GGC GGC CGCe CAG GG 3′ | nt 886-911 of apoA-I genomic sequencef that contains a NotI site (sense), intron 3 of apoA-I gene |
AISAL R | 5′ A CAT GTC GAC CCC CTT TCA GGG CAC CTG GCC TTG 3′ | ACAT + SalI site + nt 1917-1894 of apoA-I genomic sequence (antisense), at 3′ end of apoA-I gene |
the stop codon is underlined
nucleotide number of the human apoA-I cDNA sequence (57), oligonucleotide position (+) relative to the translation initiation ATG codon
amino acid position (+) refers to the mature plasma apoA-I sequence
mutagenized residues are marked in boldface type and are underlined
the restriction enzyme recognition sites are marked in boldface type
nucleotide number of the human apoA-I genomic sequence (21), oligonucleotide position (+) relative to the translation initiation ATG codon