Table 1.
General features of OG1RF compared to V583
| V583 | OG1RF | ||
| General features | |||
| Size (base pairs) | 3,218,031 | 2,739,633 | |
| G+C content (%) | 37.5 | 37.8 | |
| rRNA genes | 12 | 12 | |
| tRNA genes | 68 | 58 | |
| Genes common to both strains | 2,474* | ||
| Genes unique to OG1RF | |||
| Similar to known proteins | 114† | ||
| Conserved hypotheticals | 50 | ||
| No database match | 63 | ||
| Total | 227 | ||
| Total number of ORFs | 3,113 | 2,701‡ |
*The assessment of the genes common to both strains is based on the homology at the DNA level with the ORFs described for V583 (source TIGR [70]). The BLASTN cutoff e-value was 1e-5. †This number includes the proteins with domain polymorphism (see text for details). ‡Estimated number of ORFs calculated by adding the OG1RF-unique ORFs to the number of ORFs shared with V583.