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. 2008 Jul 31;9(7):R120. doi: 10.1186/gb-2008-9-7-r120

Table 5.

Characterization of our high ranking Oryza candidate G-protein coupled receptors

Locus QFC GPCRHMM TMHMM HMMTOP Phobius Pcut-T Pcut-H Query e-value
Upper bin
Os01g54784.1 * * 7 (out) 7 (out) 7 (out) Cand3,4,5 <e-85
Os01g61970.1 * * 8 (in) 9 (out) 7 (out) 7 (out) 7 (out) Cand7 e-150
Os01g66190.1 * * 7 (out) 7 (out) 7 (out) Cand1 e-65
Os04g36630.1 * * 7 (out) 7 (out) 7 (out) Cand1 e-60
 Os05g39730.1 * * 6 (in) 7 (out) 7 (out)
Os06g04130.1 * * 7 (in) 9 (out) 7 (out) 6 (out) 7 (out) Cand7 e-123
Os06g09930.1 * * 7 (out) 7 (out) 7 (out) 7 (out) 7 (out) GCR1 e-120
Lower bin
 Os03g36790.1 * -0.81 8 (in) 8 (in) 7 (out) 7 (out) 7 (out)
 Os07g01250.1 * -1.16 7 (out) 7 (out) 7 (out)
Os02g40550.1 * -1.17 8 (in) 8 (in) 7 (out) 7 (out) 7 (out) Cand7 e-111
Os04g42960.1 * -4.39 8 (in) 9 (out) 7 (out) 7 (out) 8 (in) Cand7 e-120
Os03g54920.1 * -8.01 7 (in) 6 (out) 7 (out) Cand2,8 <e-96
 Os02g45870.1 * -9.73 6 (in) 7 (out) 7 (out)

High ranking Oryza candidate GPCRs that are orthologous to our Arabidopsis candidate GPCRs demonstrated to interact with the Arabidopsis Gα subunit are shown in bold and BLAST e-values are provided to support their identification (see Table 1 for additional details).