Table 6.
Characterization of our high ranking Populus candidate G-protein coupled receptors
| Locus | QFC | GPCRHMM | TMHMM | HMMTOP | Phobius | Pcut-T | Pcut-H | Query | e-value |
| Upper bin | |||||||||
| Pop205267 | * | * | 7 (out) | 7 (out) | 7 (out) | Cand3,4,5 | <e-110 | ||
| Pop241510 | * | * | 7 (out) | 7 (out) | 7 (out) | 7 (out) | 7 (out) | Cand7 | e-130 |
| Pop254437 | * | * | 7 (out) | 7 (out) | 7 (out) | 7 (out) | 7 (out) | ||
| Pop256636 | * | * | 7 (out) | 7 (out) | 7 (out) | Cand7 | 0.0 | ||
| Pop561523 | * | * | 7 (out) | 7 (out) | 7 (out) | 7 (out) | 7 (out) | Cand7 | 0.0 |
| Pop569632 | * | * | 7 (out) | 7 (out) | 7 (out) | Cand1 | e-32 | ||
| Pop742547 | * | * | 7 (out) | 7 (out) | 7 (out) | Cand1 | e-110 | ||
| Pop797267 | * | * | 7 (out) | 8 (in) | 7 (out) | 7 (out) | 7 (out) | Cand7 | e-129 |
| Pop820940 | * | * | 7 (out) | 7 (out) | 7 (out) | GCR1 | e-142 | ||
| Pop272274 | * | * | 7 (out) | 8 (in) | 7 (out) | Cand1 | e-114 | ||
| Pop554569 | * | * | 7 (out) | 7 (out) | 7 (out) | 6 (in) | 7 (out) | Cand7 | e-130 |
| Pop647588 | * | * | 6 (in) | 7 (out) | 7 (out) | ||||
| Lower bin | |||||||||
| Pop294952 | * | -1.05 | 7 (out) | 7 (out) | 7 (out) | Cand2,8 | <e-115 | ||
| Pop240991 | * | -2.37 | 7 (out) | 7 (out) | 7 (out) | Cand2,8 | <e-117 | ||
| Pop273474 | * | -2.99 | 7 (out) | 7 (out) | 7 (out) | 7 (out) | 7 (out) | ||
| Pop822025 | * | -3.67 | 7 (out) | 7 (out) | 7 (out) | ||||
| Pop279432 | * | -4.84 | 7 (in) | 7 (out) | 7 (out) | ||||
| Pop796139 | * | -5.58 | 7 (in) | 8 (in) | 7 (in) | ||||
| Pop762585 | * | -6.23 | 7 (out) | 7 (out) | 7 (out) | ||||
| Pop832788 | * | -8.32 | 7 (out) | 7 (out) | 7 (out) |
Protein sequences orthologous to our Arabidopsis candidate GPCRs demonstrated to interact with the Arabidopsis Gα subunit are shown in bold and BLAST e-values are provided to support their identification (see Table 1 for additional details).