Table 2.

Power of GENN to detect correct functional epistatic loci.

Source of Noise	Power (%)
	Model 1	Model 2	Model 3	Model 4	Model 5	Model 6
None	100	100	96	91	69	72
GE	100	100	96	85	58	68
GH	7	4	15	16	14	16
PC	88	92	21	12	17	21
MS	100	100	99	82	42	74
GE+GH	3	6	14	16	11	9
GE+PC	92	95	19	11	12	16
GE+MS	100	100	93	75	48	58
GH+PC	9	9	13	15	10	11
GH+MS	1	0	0	0	0	1
PC+MS	65	85	18	13	7	9
GE+GH+PC	3	9	2	2	7	3
GE+GH+MS	5	1	0	0	0	0
GH+PC+MS	0	0	0	0	0	0
GE+PC+MS	62	81	14	9	9	9
GE+GH+PC+MS	0	0	0	0	0	0

GE = 5% Genotyping Error; GH = 50% Genetic Heterogeneity; PC = 50% Phenocopy; MS = 5% Missing Data