Table 8.

Power of GENN to detect only correct loci (from either/both genetic models) in data with genetic heterogeneity.

Source of Noise	Power (%) to Detect Only Correct Loci
	Model 1	Model 2	Model 3	Model 4	Model 5	Model 6
GH	100	100	83	71	57	68
GE+GH	100	100	83	73	58	49
GH+PC	59	57	42	49	35	40
GH+MS	99	99	77	61	46	61
GE+GH+PC	63	81	39	40	23	32
GE+GH+MS	100	100	79	72	58	53
GH+PC+MS	57	68	41	50	31	31
GE+GH+PC+MS	50	74	37	42	31	34

GE = 5% Genotyping Error; GH = 50% Genetic Heterogeneity; PC = 50% Phenocopy; MS = 5% Missing Data