Table 1.
Summary of the HIV-1 envelopes tested in the different experimental models.
Experimental model |
Host cell (HLA-C allele) |
Env (tropism/subtype) |
HLA-C siRNA silencing and cell fusion assays |
HeLa (Cw12) | ADA (R5/B) LAI (X4/B) NDK (X4/D) |
gp120/gp41 transient transfection and cell fusion assays |
CHO-HLA-C (Cw4) | 93MW965 (R5/C) 91US005 (R5/B) 92UG024 (X4/D) NDK (X4/D) J500 (X4/B) |
Pseudovirus transductions | 293T (Cw7) | pRHPA4259.7 (R5/B) 6535.3 (R5/B) NDK (X4/D) m7NDK (X4/D) |
HLA-C silencing was conducted on human cells (HeLa-derived) physiologically expressing HLA-C and stably expressing Env of different strains (ADA, LAI, NDK).
Transient transfections experiments with plasmids encoding different Envs were conducted on non-human CHO cells stably expressing HLA-C to directly compare the effect of HLA-C in the absence of other human MHC class I molecules.
Pseudoviruses were produced in HLA-C silenced 293T cells since this human cell line is the election host for efficient and quantitative production of pseudotyped virus particle. The Envs tested belong to a standard reference panel (NIBSC EVA CFAR ARP2066) except NDK.